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Tajima's D test [25] calculates the distribution of allele frequency of segregating sites, whereas Fu's FS test [26] is based on the distribution of alleles or haplotypes. 3. Results 3.1. Molecular Characterization and Genetic Diversity Table 1 shows the number of samples (N), number of haplotypes (NHap), haplotype diversity (HapD), and nucleotide diversity (��) for Volasertib cell line each population. A total of 77 individuals were sequenced for the mtDNA control region (873?bp). Among 77 samples, 94 polymorphic sites and 58 haplotypes were detected. These polymorphisms included 64 parsimony informative sites and 32 singleton sites. The nucleotide composition (%) was 31.7 (A), 27.9 (T), 23.7 (C), and 16.7 (G). The haplotype diversity (h) of the analysed populations was rather high with observed values between 1.000 �� 0.0058 in Ganga and 0.756 �� 0.01678 in Tapti population. The nucleotide diversity (��) within each population was very low, ranging from 0.00935 �� 0.0000012 in Hooghly to 0.01835 �� 0.0000059 in Tapti population (Table 1). 3.2. Haplotype Distribution and Phylogenies In phylogenetic study (Figure 1) and minimum spanning network of 58 haplotypes (Figure 2), eight populations of T. ilisha were grouped in four lineages. The haplotypes shared among different populations were 25.8%, and the rest of 74.2% were private haplotypes. Hap_8 was the most common haplotype shared among Hooghly Feeder Canal, Paradip Port, Hooghly, and Diamond Harbour populations; Hap_7 was shared among Paradip Luminespib SERCA Port and Hooghly Feeder Canal populations; Hap_24 and Hap_27 were shared between Tapti and Narmada populations, Hap_1 was shared between Hooghly Feeder Canal and Ganga populations; Hap_15 was shared between Hooghly and Ganga populations (Table 2). Figure 1 Molecular phylogenetic analysis of 58 haplotypes of T. ilisha constructed by Maximum Likelihood method. Figure 2 Minimum spanning network of T. ilisha based on D-loop haplotypes. Haplotypes separated by single lines are one mutation apart, and small circles along lines represent missing haplotypes (not sampled or extinct). Table 2 Relative haplotype frequencies in different populations of T. ilisha. 3.3. Population Genetic Analysis There is significant geographical structuring among populations only when all populations were grouped in Bay of Bengal and Arabian Sea. AMOVA revealed 4.42% variation among populations and 95.58% variation within population (Table 3), which was further supported by significant FST value (i.e., 0.0441, p